Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915210.1_cds_XP_016465082.1_58060
CDS Infomation

[gene=LOC107787967] [db_xref=GeneID:107787967] [protein=patatin-like protein 2] [protein_id=XP_016465082.1] [location=join(9549..9659,10398..10591,10665..10929,11021..11179,11260..11559,11837..12036,12125..12179)] [gbkey=CDS]
Sequence

ATGGCTAGATCATCCCAAGGAAAGGTGATAACTATTCTTAGCATTGATGGTGGAGGTGTT
AGAGGGATCATTCCCGGTACAATTCTTGCTTTTCTTGAATCCCAATTCCAGAAACTTGAC
GGAAGTGATGCTAGGATCGCAGACTACTTTGACTACATAGCAGGGACAAGCACTGGAGGT
TTAGTTACCGCAATGTTAACTACCCCAAATGAAAAGAATCGACCTTTATTTCGTGCAGAT
GAAATTACTGAATTCTATCTGAAGGAGAGCCCACATATATTCCCGCAAGATAAAGCAAAG
CCCCGGTTTAGCATTCCCGGCTGGGATACTGTAGTTAATTGGGTTAAGGACCTTTACAAC
AGATATCTTGGCCCTGTATACCATAGTGCCGAAAAAATTGTTGATTGGATCGAGTCCATG
TTGTTTCGTCCTAAATATGATGGAGAGTATTTGCGTGGGAAAATCAAGAATATGATTGGA
GATCGAAAGCTTAGCCAAACACTAACTAACGTTGTCATTCCTGCCTTTGATGTTCATGAG
TTTCAGCCAGTTATCTTTTCATCTTTACAGGCGAAAGGGGACGATTCAAAGGATTGTCTA
CTAGCAGATGTTTGCATCTCTACATCTGCAGCACCATATTACCTTCCTCCTTATCATTTT
GAAGTTAAGTCGTCCAAAGGTACCAAAATATATAACACCGTCGATGGTGGTGTTGCGGCC
AATAACCCTACTTTGCTAGCAATACGAGAAGCAACACAAGAGATGTGGAGAAGTTCATCA
TCAAGTAACAGAGCTATAGATGATGTTACATTTGTTATACTTTCACTGGGCACTGGATCA
GCAAAAGGGGTTCTAAAATTAGACGTTGATGACGGTAAGACGTGGGGATTGGTCAATTGG
TTTTTGGGGCCAGGAGATAGCACTCCCCTCATTGATGTTTTTGAGTCTGCCTTGAGTGAT
ATGGCTGATATTTATACATCTATGTTCCTACATGGCACTCCTTCAAATGATACTTACCTC
AGGATTCAGATTGATGGGTTGAAGTATGAAGATACAATGACTGACAATGCAAAAGAAGAA
AATCTGAGCAACTTGGTGGATATATCAAATGACCTGTTGAAGCGCCCTGTTTCTTCCGTC
AACTTCGAAACTGGTTTTTATGAACCCATCTCAGACAAGCGCAAACCTGTAGGAAAAGCC
GATTGGACCAACGAAATGGCTCTCGTTGAGTTGGCAAAAAAATTGTCAGATCAGAGAAAG
CTCCGCCTCAAACAAAAGGCTTGA

Peptide Sequence

PEP ID

XP_016465082.1
PEP Infomation

PREDICTED: patatin-like protein 2 [Nicotiana tabacum]
Sequence

MARSSQGKVITILSIDGGGVRGIIPGTILAFLESQFQKLDGSDARIADYFDYIAGTSTGG
LVTAMLTTPNEKNRPLFRADEITEFYLKESPHIFPQDKAKPRFSIPGWDTVVNWVKDLYN
RYLGPVYHSAEKIVDWIESMLFRPKYDGEYLRGKIKNMIGDRKLSQTLTNVVIPAFDVHE
FQPVIFSSLQAKGDDSKDCLLADVCISTSAAPYYLPPYHFEVKSSKGTKIYNTVDGGVAA
NNPTLLAIREATQEMWRSSSSSNRAIDDVTFVILSLGTGSAKGVLKLDVDDGKTWGLVNW
FLGPGDSTPLIDVFESALSDMADIYTSMFLHGTPSNDTYLRIQIDGLKYEDTMTDNAKEE
NLSNLVDISNDLLKRPVSSVNFETGFYEPISDKRKPVGKADWTNEMALVELAKKLSDQRK
LRLKQKA

Transcript Sequence

Gene sequence data has not been registered.